NASA Ames / August 2024–August 2025
Which signals survive a change in perspective?
Studying gene expression, model agreement, and the distance between a prediction and a biological explanation.
- spaceflight studies
- 3+
- npj Microgravity publication
- 2026
Spaceflight biology brings together small datasets, many measured genes, and questions that matter beyond a model score. At NASA Ames, I investigated how predictive models can help identify gene candidates that remain informative across studies and representations.
Gene-expression data and quantitative phenotypes provide complementary measurements.
Conceptual workflow based on my work; not an internal system diagram.
Two related lines of work
My research included GRIP, a framework for investigating reproducible gene–phenotype relationships, and a separate retinal transcriptomics study. They share a concern with interpretable model evidence, but they are distinct projects with different datasets and publication status.
GRIP: inspect the stability of a ranking
I proposed GRIP to investigate gene relationships across technical representations of RNA-sequencing data. The current framework combines continuous regression, transformation-based environments, invariant model variants, and ensemble gene scoring. Its detailed write-up separates what the implementation measures from stronger causal claims.
Retinal inference: connect expression to injury
For the retinal work, I contributed cross-model feature comparisons, pathway-level interpretation, and comparative results and figures to the study published in npj Microgravity in May 2026. The original analysis notebooks were developed by James Casaletto within the broader collaboration.
A prediction is a starting point
A feature ranking is evidence from a model, not proof of a biological mechanism. I care about making that evidence traceable: which data, which representation, which model, and which assumptions produced the result? The articles below walk through the actual methods and their limitations.
Keep exploring
GRIP: methods, diagrams & results ↗Retinal inference: full research write-up ↗Published npj Microgravity study ↗